Sequence Similarity Clusters for the Entities in PDB 2P1L

Entity #1 | Chains: A,C,E,G
Apoptosis regulator Bcl-X protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 19 824
95 % 24 25 1049 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 1.9
PDBFlex
90 % 25 26 1041
70 % 25 26 1064
50 % 30 31 1015
40 % 30 31 1059
30 % 82 100 246
Entity #2 | Chains: B,D,F,H
Beclin 1 protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20954
95 % 1 1 18062 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 18725
70 % 1 1 17374
50 % 1 1 15530
40 % 1 1 14391
30 % 1 1 12538

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2P1L 2 B, D, F, H Beclin 1 Beclin 1 9606