Sequence Similarity Clusters for the Entities in PDB 2P1L

Entity #1 | Chains: A,C,E,G
Apoptosis regulator Bcl-X protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 23 824
95 % 24 25 1049 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 1.9
PDBFlex
90 % 25 26 1041
70 % 25 26 1064
50 % 30 31 1015
40 % 30 31 1059
30 % 82 100 246
Entity #2 | Chains: B,D,F,H
Beclin 1 protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20954
95 % 1 1 18062 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 18725
70 % 1 1 17374
50 % 1 1 15530
40 % 1 1 14391
30 % 1 1 12538

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6QGG 1 A Apoptosis regulator Bcl-2,Bcl-2-like protein 1,Apoptosis regulator Bcl-2,Bcl-2-like protein 1 9606
2 4A1U 1 A BCL-2-LIKE PROTEIN 1 RESIDUES 1-26,83-209 9606
3 5FMK 1 A BCL-XL UNP RESIDUES 1-26,83-209 9606
4 3FDL 1 A Apoptosis regulator Bcl-X residue 1-209, Deletion of amino acids 27 to 82 9606
5 6QGK 1 A Apoptosis regulator Bcl-2,Bcl-2-like protein 1,Apoptosis regulator Bcl-2,Bcl-2-like protein 1 9606
6 2YQ6 1 A BCL-2-LIKE PROTEIN 1 RESIDUES 1-26,83-209 9606
7 4TUH 1 A, B, C, D, E, F, G, H Bcl-2-like protein 1 UNP residues 1-26, 83-209 9606
8 2YQ7 1 A BCL-2-LIKE PROTEIN 1 RESIDUES 1-26,83-209 9606
9 6QG8 1 A Apoptosis regulator Bcl-2,Bcl-2-like protein 1,Apoptosis regulator Bcl-2,Bcl-2-like protein 1 9606
10 4BPK 1 A, B BCL-2-LIKE PROTEIN 1 BCL-XL WITHOUT C-TERMINAL DOMAIN OR LOOP BETWEEN ALPHA 1 AND ALPHA 2 HELICES RESIDUES 1-26,83-209 9606
11 3ZLR 1 A, B BCL-2-LIKE PROTEIN 1 RESIDUES 1-26,83-209 9606
12 4C52 1 A, B BCL-2-LIKE PROTEIN 1 RESIDUES 1-26,83-209 9606
13 6QGJ 1 A Apoptosis regulator Bcl-2,Bcl-2-like protein 1,Apoptosis regulator Bcl-2,Bcl-2-like protein 1 9606
14 6QGH 1 A Apoptosis regulator Bcl-2,Bcl-2-like protein 1,Apoptosis regulator Bcl-2,Bcl-2-like protein 1 9606
15 5VX3 1 A, C, E, G Bcl-2-like protein 1 UNP residues 1-26 and 83-209 9606
16 3INQ 1 A, B Bcl-2-like protein 1 residues 1-209 9606
17 3R85 1 A, B, C, D Bcl-2-like protein 1 residues 1-209 with the deletion of residues 27-82 9606
18 4Z9V 1 A, B Bcl-2-like protein 1,APOPTOSIS REGULATOR BCL-XL 9606
19 4QVX 1 A, B Bcl-2-like protein 1 SEE REMARK 999 9606
20 3FDM 1 A, B, C Apoptosis regulator Bcl-X residue 1-209, Deletion of amino acids 27 to 82 9606
21 4C5D 1 A, B BCL-2-LIKE PROTEIN 1 RESIDUES 1-26,83-209 9606
22 5B1Z 1 A, B Bcl-2-like protein 1 UNP residues 1-209, with deletion of residues 27-82 9606
23 2YJ1 1 A, C BCL-2-LIKE PROTEIN 1 RESIDUES 1-26,83-209 9606
24 6DCO 1 A, B Bcl-2-like protein 1,Bcl-2-like protein 1 9606
25 3IO8 1 A, C Bcl-2-like protein 1 residues 1-26, and residues 83-209 9606
26 5FMJ 1 A BCL-2-LIKE PROTEIN 1 DELETION OF RESIDUES 27-82 UNP RESIDUES 1-26,83-209 9606
27 6DCN 1 A, B BCL-xl protein 9606
28 4A1W 1 A, B, C, D BCL-2-LIKE PROTEIN 1 9606
29 5C3G 1 A Bcl-2-like protein 1,Bcl-2-like protein 1 Deletion mutation performed to remove flexible loop, removing residues 27-82. Numbering is correct in the pdb file. UNP residues 1-26,UNP residues 83-209 10090
30 2P1L 1 A, C, E, G Apoptosis regulator Bcl-X Bcl-XL Delta-loop 9606
31 4CIN 1 A, B BCL-2-LIKE PROTEIN 1 RESIDUES 1-26,83-209 9606