Sequence Similarity Clusters for the Entities in PDB 2P1L

Entity #1 | Chains: A,C,E,G
Apoptosis regulator Bcl-X protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 23 803
95 % 24 25 1015 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 1.9
PDBFlex
90 % 25 26 1015
70 % 25 26 1039
50 % 30 31 1002
40 % 30 31 1040
30 % 81 99 239
Entity #2 | Chains: B,D,F,H
Beclin 1 protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26239
95 % 1 1 17901 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 18535
70 % 1 1 16374
50 % 1 1 14724
40 % 1 1 14274
30 % 1 1 12424

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures