Sequence Similarity Clusters for the Entities in PDB 2OCS

Entity #1 | Chains: A
Na(+)/H(+) exchange regulatory cofactor NHE-RF2 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 87125
95 % 2 2 40033 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 38107
70 % 6 11 7535
50 % 7 13 4405
40 % 7 13 4317
30 % 8 16 3388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures