Sequence Similarity Clusters for the Entities in PDB 2O6V

Entity #1 | Chains: A,C,E,G
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 181 397 4
95 % 221 495 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 227 506 6
70 % 248 554 9
50 % 253 575 10
40 % 253 579 12
30 % 260 596 18
Entity #2 | Chains: B,F
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 20 1530
95 % 222 495 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 228 506 6
70 % 249 554 9
50 % 254 575 10
40 % 254 579 12
30 % 261 596 18
Entity #3 | Chains: D,H
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55297
95 % 223 495 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 229 506 6
70 % 250 554 9
50 % 255 575 10
40 % 255 579 12
30 % 262 596 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures