Sequence Similarity Clusters for the Entities in PDB 2NP0

Entity #1 | Chains: A
Botulinum neurotoxin type B protein, length: 1290 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 14 4614
95 % 12 16 4113 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 12 16 4255
70 % 12 16 4217
50 % 12 16 4128
40 % 12 18 3449
30 % 12 26 2127
Entity #2 | Chains: B
Synaptotagmin-2 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 77739
95 % 2 3 17138
90 % 2 3 16025
70 % 2 3 15022
50 % 4 6 6752
40 % 4 6 6527
30 % 4 6 6127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures