Sequence Similarity Clusters for the Entities in PDB 2M0J

Entity #1 | Chains: A
Calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 148 168 100
95 % 187 213 79
90 % 194 220 83
70 % 198 225 87
50 % 203 234 110
40 % 262 341 67
30 % 262 342 69
Entity #2 | Chains: B
Peptide from Cyclic nucleotide-gated olfactory channel protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 36257
95 % 1 2 35368
90 % 1 2 28633
70 % 1 2 28346
50 % 1 2 26466
40 % 1 2 20811
30 % 1 2 21400

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures