2KOX

NMR residual dipolar couplings identify long range correlated motions in the backbone of the protein ubiquitin


Sequence Similarity Clusters for the Entities in PDB 2KOX

Entity #1 | Chains: A
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 399 426 4
95 % 491 525 4
90 % 326 353 19
70 % 553 591 9
50 % 567 607 10
40 % 569 611 12
30 % 584 634 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6Q00 1 A Ubiquitin 9606
2 6Q01 1 A, B Ubiquitin 9913
3 5NVG 1 A Polyubiquitin-B 9606
4 4XOF 1 A Ubiquitin 9606
5 3A9J 1 A Ubiquitin 10090
6 3A9J 2 B Ubiquitin 10090
7 5GOB 1 A Ubiquitin 9606
8 5GOB 2 B D-ubiquitin 9606
9 5W46 1 A, B Polyubiquitin-B 9606
10 5GOD 1 A, B Ubiquitin 9606
11 5GOD 2 C, D D-ubiquitin 9606
12 5XVE 2 B Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9913
13 3NHE 2 B Ubiquitin 9606
14 5DK8 1 A, B Polyubiquitin-B Ubiquitin, UNP residues 2-75 9606
15 1YJ1 1 A, B, C Ubiquitin residues 1-76 9606
16 6SQO 3 C, F Ubiquitin-40S ribosomal protein S27a GSGGS LINKER AT THE N-TERMINUS RESULTED FROM CLONING. G76 IN CHAINS C and F ARE COVALENTLY LINKED TO K85 SIDE CHAIN IN CHAINS B AND E, RESPECTIVELY. 9606
17 5NL4 1 A, B, C Polyubiquitin-C 9606
18 5V1Y 2 C, D Ubiquitin 9606
19 4M0W 2 B Ubiquitin 9913
20 4Y1H 1 A Ubiquitin-40S ribosomal protein S27a K33 linked tri-Ubiquitin. 9913
21 1YIW 1 A, B, C Ubiquitin 9606
22 1OGW 1 A UBIQUITIN LEF IS (4S)-5-FLUORO-L-LEUCINE RESIDUES 1-76 9606
23 2WWZ 1 A, B UBIQUITIN 9913
24 5KYC 2 C Polyubiquitin-B UNP residues 1-76 9606
25 4IUM 2 B Ubiquitin UNP residues 1-75 9606
26 3A9K 1 A Ubiquitin 10090
27 3A9K 2 B Ubiquitin 10090
28 5KYF 2 C Polyubiquitin-B UNP residues 1-76 9606
29 1XD3 2 B, D UBC protein 9606
30 5NLF 1 A, B, C Polyubiquitin-C 9606
31 4ZPZ 1 A, B Polyubiquitin-B ubiquitin, UNP residues 1-73 9606
32 6E2B 1 A, C, E, G, I, P Ubiquitin 9913
33 4UN2 1 A UBIQUITIN 9606
34 4PIH 1 A, B Ubiquitin 9606
35 2ZCC 1 A, B, C Ubiquitin 9913
36 4PIJ 1 A, B Ubiquitin 9606
37 5NLI 1 A, B, C Polyubiquitin-C 9606
38 5YT6 1 A, C, E, G Ubiquitin 9606
39 4V3L 2 B, D POLYUBIQUITIN-C G76 IN CHAIN B IS COVALENTLY LINKED TO K85 SIDE CHAIN IN CHAIN A. RESIDUES 77-152 9606
40 4LJO 2 B Polyubiquitin-C unp residues 77-152 9913
41 3BY4 2 B Ubiquitin 9606
42 6FDK 2 B Polyubiquitin-B 9606
43 5K9P 1 A Polyubiquitin-B 9606
44 5NLJ 1 A, B, C Polyubiquitin-B 9606
45 5KYD 1 D Polyubiquitin-B UNP residues 1-76 9606
46 4XYZ 1 A, B Polyubiquitin-C UNP residues 77-152 9913
47 3M3J 1 A, B, C, D, E, F Ubiquitin 9913
48 2ZNV 2 B, E Ubiquitin 10090
49 2ZNV 3 C, F Ubiquitin 10090
50 5OXH 1 A Ubiquitin T66V/L67N mutant 9606
51 5EMZ 1 A, C, E Polyubiquitin-B 9606
52 5EMZ 2 B, D, F Polyubiquitin-B 9606
53 6B7M 2 B, C Polyubiquitin-C 9606
54 6HEI 2 B Polyubiquitin-B 9606
55 3VUX 1 A, B, C Polyubiquitin-C Ubiquitin 9606
56 2ZCB 1 A, B, C Ubiquitin 9606
57 5OXI 1 A, B Ubiquitin L67S mutant 9606
58 4K1R 2 B, D Polyubiquitin-C 9606
59 6HPR 2 B, D Polyubiquitin-B Ubiquitin residues 1-76 contains N-terminal GSGGS after TEV cleavage. Chain D Gly76 forms isopeptide linkage with Chain C Lys85. 9606
60 3PRP 2 B, D Ubiquitin 9606 3.4.19.12 | Details
61 4I6N 2 B, D Ubiquitin 9606
62 5AF5 1 A POLYUBIQUITIN-C 9606
63 5J8P 1 A ubiquitin 9606
64 5J8P 2 B D-ubiquitin 9606
65 4K7U 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
66 6EI1 2 B Polyubiquitin-B 9606
67 6FGE 2 C Polyubiquitin-B 9606
68 2J7Q 2 B, D UBIQUITIN THE C-TERMINAL GLY 76 IS REPLACED BY THE VINYLMETHYLESTER MOIETY UBIQUITIN FUSED TO VINYLMETHYLESTER, UBVME, RESIDUES 1-75 9606
69 3NS8 1 A, B Ubiquitin 9606
70 5GOJ 1 A Ubiquitin 9606
71 5GOJ 2 B D-ubiquitin 9606
72 6OI4 2 C, D ubiquitin 9606
73 1UBI 1 A UBIQUITIN 9606
74 2D3G 1 A, B ubiquitin 9913
75 5GOC 1 A Ubiquitin 9606
76 5GOC 2 D D-ubiquitin 9606
77 5X3N 1 A Polyubiquitin-B UNP residues 1-76 9606
78 5XIU 2 B Ubiquitin-40S ribosomal protein S27a 10090
79 5TXK 2 B Polyubiquitin-B 9606
80 5WFI 2 C, D Ubiquitin 9606
81 6W9R 1 M, N, O, P, Q, R, S, T, U, V, W, X Ubiquitin 9606
82 1UBQ 1 A UBIQUITIN 9606
83 6B7O 2 B, C Polyubiquitin-C 9606
84 4ZFR 2 B ubiquitin unp residues 77-152 9606
85 4MSM 2 B, D Ubiquitin UNP residues 77-152 9606
86 6GLC 2 B Polyubiquitin-B 9606
87 3N32 1 A Ubiquitin 9606
88 5L8H 2 B Polyubiquitin-B Recombinant expression followed by chemical synthesis. 9606
89 3ONS 1 A Ubiquitin 9606
90 5XU8 2 B Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9913
91 3MHS 4 D Ubiquitin 9606
92 5M93 1 A, B, C Polyubiquitin-B 9606
93 4K7W 1 A, B, C ubiquitin UNP residues 1-76 9606 6.3.2.19 | Details
94 2HD5 2 B Polyubiquitin residues 1-76 9913
95 5NMC 1 A, B, C Polyubiquitin-C 9606
96 5GOI 1 A, B Ubiquitin 9606
97 5GOI 2 C, D D-ubiquitin 9606
98 1WRD 2 B Ubiquitin 9913
99 5GVI 2 B ubiquitin 10090
100 5GVI 3 C ubiquitin 10090
101 4K7S 1 A, B, C ubiquitin UNP residues 1-73 9606 6.3.2.19 | Details
102 2FCS 1 A, B Ubiquitin residues 1-76 9606
103 4Q5E 2 B Polyubiquitin 4932 6.3.2.19 | Details
104 5V1Z 2 C, D Ubiquitin 9606
105 3ALB 1 A, B, C, D ubiquitin 9606
106 6GZS 2 B Polyubiquitin-B 9606
107 5D0M 3 B Polyubiquitin-B UNP residues 1-76 9606
108 5XIS 2 B, E Ubiquitin-40S ribosomal protein S27a 10090
109 5XIS 3 C, F Ubiquitin-40S ribosomal protein S27a 10090
110 4PIG 1 A, B, C, D Ubiquitin 9606
111 5X3M 1 A Polyubiquitin-B 9606
112 5X3M 2 D D-ubiquitin D-Ub-S65E-NH2 9606
113 5NL5 1 A, B, C Polyubiquitin-B 9606
114 6SQS 3 C, F Ubiquitin-40S ribosomal protein S27a Contains a GSGGS at the N-terminus resulted from cloning. G76 in Chains C and F form a covalent bond with K85 sidechain in Chains B and E, respectively. 9606
115 4MSQ 2 B, D Ubiquitin UNP residues 77-152 9606
116 4LDT 2 B Ubiquitin aldehyde 9606
117 4LDT 4 D Ubiquitin 9606
118 3VUW 1 A, B, C Polyubiquitin-C Ubiquitin 9606
119 3TMP 2 B, D, F, H Polyubiquitin-C Ubiquitin-like 1 9606
120 2QHO 1 A, C, E, G Ubiquitin 9913
121 3H7P 1 A Ubiquitin 9606
122 3H7P 2 B Ubiquitin 9606
123 4WZP 1 A, B, C, D, E, F, G, H ubiquitin phosphorylation at Ser65 UNP residues 1-76 9606
124 3EHV 1 A, B, C Ubiquitin 9606 6.3.2.19 | Details
125 5GO7 1 A Ubiquitin 9606
126 5GO7 2 B D-ubiquitin 9606
127 1P3Q 2 U, V Ubiquitin 9913
128 2OOB 2 B Ubiquitin 9913
129 5ULF 2 B, D Ubiquitin 9606
130 5KYE 2 C, D Polyubiquitin-B UNP residues 1-76 9606
131 6ISU 2 B Ubiquitin 9606
132 6ISU 3 C Ubiquitin 9606
133 6ULH 3 E Ubiquitin 9606
134 5ULH 2 B Ubiquitin 9606
135 3HM3 1 A, B, C, D Ubiquitin 9606
136 5LRW 2 B, D Polyubiquitin-B Gly76 was replaced with 2-bromoethylamine 9606
137 5GOK 1 A Ubiquitin 9606
138 5GOK 2 B D-ubiquitin 9606
139 4WLR 3 C Polyubiquitin-B 9606
140 3WWQ 1 A, D, G, J Ubiquitin 10090
141 3WWQ 2 B, E, H, K Ubiquitin 10090
142 6K9P 2 G Ubiquitin 9606
143 3EFU 1 A Ubiquitin 9606
144 4Q5H 2 B Polyubiquitin 4932 6.3.2.19 | Details
145 5AF4 1 A, B, C, D, E, F, G, H UBIQUITIN ISOPEPTIDE LINKAGES BETWEEN A76 C AND B33 NZ, C76 C AND D33 NZ, E76 C AND F33 NZ 9606
146 4V3K 2 B, E POLYUBIQUITIN-C LYS85 IN CHAINS A AND D IS COVALENTLY LINKED TO GLY76 IN CHAINS B AND E, RESPECTIVELY. RESIDUES 77-152 9606
147 4IG7 2 B Ubiquitin 9606
148 2JF5 1 A, B UBIQUITIN ISO-PEPTIDE LINK BETWEEN A-LYS63 AND B-GLY76 9606
149 5MN9 1 A, B Ubiquitin-40S ribosomal protein S27a 9913
150 5WVO 1 A, B Ubiquitin 9606
151 1UZX 2 B UBIQUITIN 9913
152 5YDR 1 A, D Polyubiquitin-B UNP residues 1-73 9606
153 1S1Q 2 B, D ubiquitin 9606
154 6SQR 3 C, F, L Ubiquitin-40S ribosomal protein S27a Contains a GSGGS at the N-terminus resulted from cloning. G76 in Chains C, F, L form a covalent bond with K85 sidechain in Chains B, E, K, respectively. 9606
155 6SQR 6 I Polyubiquitin-C Contains a GSGGS at the N-terminus resulted from cloning. G76 in Chain I form a covalent bond with K85 sidechain in Chain H. 9606
156 6QML 2 B, E Polyubiquitin-B Met 1 substituted with Norleucine (NLE) 9606
157 6QML 3 C, F Polyubiquitin-C 9606
158 4LJP 2 B Polyubiquitin-C unp residues 77-152 9913
159 3VUY 1 A, B, C Polyubiquitin-C Ubiquitin 9606
160 3PHW 2 B, D, F, H Ubiquitin-40S ribosomal protein S27a UNP residues 1-75 9606
161 4PQT 2 B Protein UBBP4 unp residues 77-152 9606
162 5BZ0 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin from bovine erythrocytes 9913
163 4XKL 1 A, C Ubiquitin 9606
164 4FJV 2 B, D Polyubiquitin-C 9606
165 6P5B 3 E Ubiquitin 9606
166 5DFL 1 B Ubiquitin 9606
167 2C7N 2 B, D, F, H, J, L UBIQUITIN 9913
168 6UPU 2 B, C, D, F, G, H, J, K, L, N, O, P Ubiquitin 9606
169 5GOH 1 A Ubiquitin 9606
170 5GOH 2 D D-ubiquitin 9606
171 3ZNI 4 D, H, L, P POLYUBIQUITIN-C CARBONYL CARBON OF G76 IN CHIANS D, H, L AND P FORMS AN ISOPEPTIDE LINKAGE WITH THE SIDECHAIN OF K85 IN CHAINS C, G, K AND O, RESPECTIVELY. GSGGS LINKER AT THE N- TERMINUS OF PROTEIN RESULTED FROM CLONING RESIDUES 77-152 9606
172 2G45 2 B, E Ubiquitin 9606
173 6AQR 4 D Polyubiquitin-C 9606
174 5MNJ 2 B, F Polyubiquitin-B gsggs linker at the N-terminus resulted from cloning. G76 in chain B is covalently linked to K85 side chain in Chain A. 9606
175 5ZQ3 2 C, D Ubiquitin 9606
176 5ZQ4 2 C, D ubiquitin 9606
177 4RF1 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
178 5JBY 1 A, C, E ubiquitin 9606
179 5JBY 2 B, D, F D-ubiquitin 9606
180 5IFR 2 B Polyubiquitin-B 9606
181 2IBI 2 B Ubiquitin 9606
182 5L6H 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
183 6W9S 2 B Ubiquitin 9606
184 6JB7 1 B Ubiquitin 9606
185 5GOG 1 A Ubiquitin 9606
186 5GOG 2 B D-ubiquitin 9606
187 4AUQ 3 C, F POLYUBIQUITIN-C UBIQUITIN, RESIDUES 1-76 9606
188 4NNJ 2 B, D, E Uba1 UNP residues 1-76 4932
189 4Z9S 1 A, B, C, D Ubiquitin-40S ribosomal protein S27a UNP RESIDUES 1-76 9913
190 2XEW 1 A, B, C, D, E, F, G, H, I, J, K, L UBIQUITIN UBIQUITIN POLYMER LINKED THROUGH LYS11 IN AN ISOPEPTIDE LINKAGE 9606
191 2WDT 2 B, D UBIQUITIN C-TERMINAL GLY76 OF WILDTYPE UBIQUITIN IS REPLACED BY A VINYL METHYLESTER MOIETY (UBVME) RESIDUES 1-75 9606
192 1AAR 1 A, B DI-UBIQUITIN 9913
193 4AP4 3 C, F UBIQUITIN C ISOPEPTIDE AMIDE LINKED TO UBCH5A (CHAIN B AND CHAIN E) RESIDUES 76-152 9606
194 4UEL 2 B POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH-L5 9606
195 6OQ1 1 A, B Ubiquitin 9606
196 6OQ1 2 C, D Ubiquitin 9606
197 6OQ1 3 E, F Ubiquitin 9606
198 6RYA 2 B, D, F Polyubiquitin-C 9606
199 4ZFT 2 B, D Polyubiquitin-B unp residues 77-152 9606
200 2WX0 1 A, B, E, F UBIQUITIN 9913
201 3A1Q 1 A, D Ubiquitin 10090
202 3A1Q 2 B, E Ubiquitin 10090
203 5TR4 2 B, D Ubiquitin 9913
204 4BOS 2 C, E POLYUBIQUITIN-C RESIDUES 1-76 9606
205 3H7S 1 A, B Ubiquitin 9606
206 3C0R 2 B, D Ubiquitin 9606
207 5AIU 3 C, F POLYUBIQUITIN-C CHAIN B COVALENTLY LINKED TO CHAINS C, CHAIN E IS COVALENTLY LINKED TO CHAIN F UNP RESIDUES 1-76 9606
208 6PGV 2 B Polyubiquitin-B 9606
209 4S22 1 A, B, C, D Ubiquitin residues 77-152 9913
210 2C7M 2 B UBIQUITIN 9913
211 1TBE 1 A, B TETRAUBIQUITIN 9606
212 6NXK 1 A, B Polyubiquitin-C 9606
213 3PT2 2 B Ubiquitin B 9606
214 5VZW 2 C, D Ubiquitin 9606
215 3PRM 2 B, D Ubiquitin 9606 3.4.19.12 | Details
216 6KG6 2 C Ubiquitin-40S ribosomal protein S27a 9606
217 4R62 2 B Ubiquitin-40S ribosomal protein S27a Ubiquitin 9606
218 5EYA 3 C, D Polyubiquitin-B UNP residues 1-76 9606
219 5GO8 1 A ubiquitin 9606
220 5GO8 2 B D-ubiquitin 9606
221 3A33 2 B Ubiquitin 9606
222 3VHT 3 C Ubiquitin 10090
223 5XIT 1 D, F Ubiquitin-40S ribosomal protein S27a 10090
224 5XIT 3 B, H Ubiquitin-40S ribosomal protein S27a 10090
225 6ASR 1 A, C Ubiquitin residues 1-76 9606
226 2FCN 1 A, B Ubiquitin residues 1-76 9606
227 4DHJ 2 B, F, J, M Ubiquitin aldehyde 9606
228 4DHJ 3 D, H Ubiquitin 9606
229 3ZNH 2 B POLYUBIQUITIN-B GLY76 IS REPLACED WITH A PROPARGYL GROUP 9606
230 4BBN 2 C POLYUBIQUITIN-B RESIDUES 1-76 9913
231 4BBN 3 F POLYUBIQUITIN-B RESIDUES 229-304 9913
232 4NQL 2 B Ubiquitin 10090
233 4NQL 3 C Ubiquitin 10090
234 1NBF 2 C, D Ubiquitin aldehyde 9606
235 2O6V 1 A, C, E, G Ubiquitin 9606
236 2O6V 2 B, F Ubiquitin 9606
237 2O6V 3 D, H Ubiquitin 9606
238 3OFI 2 C, D Ubiquitin 9606
239 6UMS 3 E Ubiquitin 9606
240 3AUL 1 A, B Polyubiquitin-C Ubiquitin 9606
241 3UGB 2 B Polyubiquitin-C unp residues 1-76 9606
242 5JBV 1 A Ubiquitin 9606
243 5JBV 2 B D-ubiquitin 9606
244 5X3O 1 A Polyubiquitin-B UNP residues 1-76 9606
245 5X3O 2 D D-ubiquitin 9606
246 5ULK 2 B Ubiquitin 9606
247 5ZQ5 2 B, D Ubiquitin 9606
248 6FX4 2 B, D Polyubiquitin-B 9606
249 3NOB 1 A, B, C, D, E, F, G, H Ubiquitin 9606
250 6QK9 1 A, B, C, D, E, F, G, H, I, J, K, L Polyubiquitin-B 9606
251 3IFW 2 B Ubiquitin 9606
252 6A6I 2 B, D Polyubiquitin-B UNP residues 1-76 9606
253 6A6I 3 F, H Polyubiquitin-B UNP residues 1-77 9606
254 2FCM 1 A, B Ubiquitin residues 1-76 9606
255 6JWI 1 G, I Ubiqutin 10090
256 4KSK 2 C, D Polyubiquitin-C unp residues 76-152 9606
257 5L6J 2 B, D Ubiquitin-40S ribosomal protein S31 4932
258 5OHL 2 I, J, K, L, M, N, O, P Polyubiquitin-B 9606
259 3I3T 2 B, D, F, H Ubiquitin 9606
260 5FER 3 C, F Ubiquitin-40S ribosomal protein S27a 9913
261 5OHK 2 B Polyubiquitin-B 9606
262 1CMX 2 B, D PROTEIN (UBIQUITIN YUH1-UBAL) UBIQUITIN C-TERMINUS MODIFIED TO AN ALDEHYDE ALL 9606 3.1.2.15 | Details
263 6JKY 3 C, F Ub 48269
264 3OJ3 1 A, B, C, D, E, F, G, H Ubiquitin Ubiquitin, UNP residues 1-76 9606
265 5N38 2 B Polyubiquitin-B Ser65 is phosphorylated 9606
266 3O65 2 B, D, F, H Ubiquitin 9606
267 5CRA 2 C, D Polyubiquitin-B UNP residues 1-75 9606
268 6IF1 2 C, D Ubiquitin 9606
269 5U4P 3 C Ubiquitin-40S ribosomal protein S31 4932
270 5L6I 2 B, D, E Ubiquitin-40S ribosomal protein S31 4932
271 6O82 2 B, D Ubiquitin-60S ribosomal protein L40 residues 1-76 4896
272 5XPK 1 A Ubiquitin 9606
273 5XPK 2 B D-ubiquitin 9606
274 5XDP 1 B D-ubiquitin 9606
275 5XDP 2 A ubiquitin-B K11/48-branched teraubiquitin 9606
276 5D0K 3 B, E, H, K Polyubiquitin-B UNP residues 1-76 9606
277 5OHV 1 A, C Ubiquitin 9606
278 5TUT 2 B Ubiquitin 9606
279 3OLM 2 D Ubiquitin 4932
280 3CMM 2 B, D Ubiquitin 559292
281 4MDK 2 E, F, G, H Ubiquitin UNP residues 76-152 9606
282 5N2W 2 B Polyubiquitin-B Ser65 is phosphorylated to give SEP65 9606
283 7BXG 3 D Polyubiquitin-C 9606
284 4MM3 1 A Ubiquitin UNP residues 1-76 9606
285 2FIF 1 A, C, E Ubiquitin 9913
286 5JQS 2 D Ubiquitin-40S ribosomal protein S27a 9913
287 5YDK 2 B, E, H, K Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9606
288 5YDK 3 C, D, I, J Ubiquitin-40S ribosomal protein S27a UNP residues 1-76 9606
289 2XBB 2 C, D UBIQUITIN 9913
290 2GMI 3 C Ubiquitin 9606
291 6KL4 3 C Ub 9606
292 3DVG 3 X Ubiquitin D77 9606
293 3DVG 4 Y Ubiquitin 9606
294 1WR6 2 E, F, G, H ubiquitin 9913
295 3LDZ 1 E, F, G Ubiquitin 9913
296 3PTF 2 C, D Polyubiquitin-B Ubiquitin 9606
297 5ZQ7 2 B, D Ubiquitin 9606
298 6XAA 2 B Ubiquitin-propargylamide 9606
299 3RUL 1 A, B, C, D Ubiquitin 9606
300 5BNB 2 E, F, G, I Polyubiquitin-B 9606
301 6K2U 1 B Polyubiquitin-C 9606
302 5LRX 2 B, D Polyubiquitin-B Gly76 was replaced with propargylamide 9606
303 5CAW 2 B, D Polyubiquitin-B phosphorylated at Ser65 Gly76 exchanged with chemical probe, bromopropylamine. The bromide was lost during the coupling. 9606
304 4XOK 1 A, B, C Ubiquitin 9606
305 3MTN 2 B, D UBIQUITIN VARIANT UBV.21.4 9606
306 5ZQ6 2 B, D Ubiquitin 9606
307 5LRV 2 B Polyubiquitin-B Lys11 was replaced with a diaminobutyric acid (DAB) residue 9606
308 5LRV 3 C Polyubiquitin-B Gly76 was replaced with a ligation handle for diubiquitin probe generation 9606
309 6S53 2 D, F, J, L Polyubiquitin-C 9606
310 3DVN 3 U, X Ubiquitin D77 9606
311 3DVN 4 V, Y Ubiquitin 9606
312 5L8W 3 C Polyubiquitin-B Recombinant expression followed by chemical synthesis 9606
313 6KFP 3 D Ubiquitin-40S ribosomal protein S27a 9606
314 1F9J 1 A, B TETRAUBIQUITIN 9606
315 2FID 1 A Ubiquitin 9913
316 5OHP 2 B, C Polyubiquitin-B 9606
317 4HXD 1 A, C Polyubiquitin-C 9606 3.4.19.12 | Details
318 1YD8 1 U, V UBIQUIN 9913
319 4BOZ 2 B, C, E UBIQUITIN-C 9606
320 3WXG 2 B, E Ubiquitin 10090
321 3WXG 3 C, F Ubiquitin UNP residues 1-72 10090
322 6CP2 3 C Polyubiquitin-B 9606
323 4XKH 1 A, B, D, F, G, I Polyubiquitin-C UNP RESIDUES 77-152 9913
324 3IHP 2 C, D Ubiquitin 9606
325 5LN1 2 U Polyubiquitin-B 9606
326 3K9P 2 B Ubiquitin 9606
327 4BVU 3 C UBIQUITIN OXYESTER LINK BETWEEN G76 AND UBCH5C S85 9606
328 6JB6 1 B Ubiquitin 9606
329 3JSV 1 A Ubiquitin 9606
330 3JSV 2 B Ubiquitin 9606
331 3TBL 2 D, E Ubiquitin 9606
332 2HTH 1 A Ubiquitin 9606
333 3KW5 2 B Ubiquitin 9606
334 6EQI 1 A Ubiquitin 9606
335 5E6J 2 B, E ubiquitin 32630
336 5E6J 3 C, F Polyubiquitin-B 32630
337 2XK5 1 A UBIQUITIN 9606
338 2XK5 2 B UBIQUITIN 9606
339 6OAM 2 C, D Ubiquitin 9606
340 4JQW 2 C Polyubiquitin-C Ubiquitin 9606
341 4RF0 2 B Ubiquitin-60S ribosomal protein L40 UNP residues 1-75 9606
342 3KVF 2 B Ubiquitin 9606
343 6FYH 2 B Polyubiquitin-B 9606
344 6O83 2 B, D Ubiquitin-60S ribosomal protein L40 residues 1-75 4896
345 5AF6 1 A, B, C, D, E UBIQUITIN ISOPEPTIDE BONDS ACROSS BETWEEN CHAINS, A76 C AND D33 NZ, B76 C AND A33 NZ, C76C AND B33 NZ, E76 C AND C33 NZ. ISOPEPTIDE BOND ACROSS THE ASU FOR, D76 C AND E33 NZ SYMM 9606
346 3H1U 1 A, B Ubiquitin 9913
347 6HEK 2 B, D Polyubiquitin-B 9606
348 6PZV 1 A, B, E, F Ubiquitin 9606
349 5JTJ 2 B Polyubiquitin-B 9606
350 2WX1 1 A, B UBIQUITIN 9913
351 6UMP 1 E Ubiquitin 9606
352 4WUR 2 B Polyubiquitin-B UNP residues 1-76 9606
353 4S1Z 1 A, B, C, D, E Ubiquitin residues 1-76 9606
354 6DC6 2 B, D Ubiquitin 9606
355 4XOL 1 A, B Ubiquitin 9606
356 5JP3 2 B, D, F, H Polyubiquitin-B 9606
357 4P4H 3 S, T, U, W, X Ubiquitin-60S ribosomal protein L40 9606
358 5O44 1 A, E Ubiquitin 7370
359 5O44 2 B, C Polyubiquitin-B 9606
360 5O44 3 D, F Polyubiquitin-B 9606
361 3PHD 2 E, F, G, H Polyubiquitin 9606
362 5YIK 2 C, D, F ubiquitin UNP RESIDUES 1-76 9606
363 5ZBU 3 E Ubiquitin 9606
364 3N30 1 A, B Ubiquitin 9606
365 3ZLZ 1 A, B UBIQUITIN TRI-UBIQUITIN CHAIN LINKED VIA LYS6. K48R IN BOTH MOLECULES. ISOPEPTIDE LINKAGES ARE NOT RESOLVED. 9606
366 6W9D 3 C, F, I Ubiquitin Linked to Ube2d2 via isopeptide bond between G76 of ubiquitin and Lys85 of Ube2d2 9606
367 3JVZ 3 X, Y Ubiquitin 9606
368 4DHZ 2 B Ubiquitin aldehyde 9606
369 4DHZ 3 E Ubiquitin 9606
370 5YIJ 2 C, D, G Ubiquitin UNP RESIDUES 1-76 9606
371 5UDH 3 E Ubiquitin C variant Hexa-his N-terminal tagged protein UNP residues 17-92 9606
372 5AIT 3 C, F POLYUBIQUITIN-C UNP RESIDUES 1-76 9913
373 3VFK 1 A ubiquitin, C-terminal fused by Cys-Lys-D-Ala-D-Ala 9606
374 3JW0 3 X, Y Ubiquitin 9606
375 4LCD 3 E, F Ubiquitin UNP residues 1-75 9606
376 4DDG 2 D, E, F, G, H, I, M, N, O, P, Q, R Polyubiquitin-C 9606
377 5JTV 2 B, D, F, H Polyubiquitin-B 9606
378 5OHN 2 B, D Polyubiquitin-B 9606
379 2FCQ 1 A, B Ubiquitin residues 1-76 9606
380 3EEC 1 A, B Ubiquitin 9606
381 5VNZ 3 C, F Ubiquitin 9606
382 6H4H 2 C, D Polyubiquitin-B 9606
383 4NQK 2 E, F, G, H, I, J Ubiquitin UNP residues 76-152 9606
384 4DDI 2 D, E, F, G, H, I Polyubiquitin-C 9606
385 5H7S 1 E, F Ubiquitin-like 1 9606
386 5EDV 3 E, F, G, H Polyubiquitin-B UNP residues 1-76 9606
387 4UF6 2 B, E, H, K POLYUBIQUITIN-B GLY76 OF UBIQUITIN IS REPLACED BY GLY-AYE THAT IS COVALENTLY LINKED TO THE ACTIVE SITE CYS88 OF UCH- L5 9606
388 5OHM 1 A, C, E, G, I, K Polyubiquitin-C 9606
389 4ZUX 10 X, c, h, m Polyubiquitin-B 9606
390 2DX5 2 B Ubiquitin 9913
391 3OJ4 2 B, E Ubiquitin Ubiquitin, UNP residues 1-76 9606
392 5VO0 3 C, F Ubiquitin 9606
393 6DJW 2 B Ubiquitin 9913
394 2AYO 2 B Ubiquitin 9606
395 5KHY 1 A Polyubiquitin-B 9606
396 5KHY 2 B Polyubiquitin-B 9606
397 6DJX 2 B Ubiquitin 9913
398 4JIO 2 U Ubiquitin 9606
399 4WHV 3 A, F, G, L Polyubiquitin-B unp residues 1-76 9606
400 6VEN 7 K Ubiquitin 9606
401 6TTU 7 U Polyubiquitin-C 9606
402 6VAE 3 C, D Ubiquitin isopeptide bond between C-terminus of ubiquitin (chain C) and Lys523 Nz of FANCI (chain A); isopeptide bond between C-terminus of ubiquitin (chain D) and Lys561 Nz of FANCD2 (chain B) 9606
403 6VAF 3 D Ubiquitin 9606
404 6TNF 3 C Polyubiquitin-C 9606
405 6V5D 1 A Ubiquitin 9606
406 6UYI 1 C Ubiquitin 9606
407 6UYI 2 D Ubiquitin 9606
408 6UYJ 1 C Ubiquitin 9606
409 6UYJ 2 D Ubiquitin 9606
410 6TBM 15 R Polyubiquitin-B 9606
411 6T9L 12 O Polyubiquitin-C 9606
412 6UH5 11 Q Ubiquitin 9606
413 6KOW 1 A Polyubiquitin-B 9606
414 6KOX 1 A Polyubiquitin-B 9606
415 6KIU 11 O Ubiquitin 9606
416 6KIV 9 O Ubiquitin 9606
417 6KIW 9 O Ubiquitin 9606
418 6K4I 1 A ubiquitin 9606
419 6OQ2 1 B Ubiquitin 9606
420 6OQ2 2 D Ubiquitin 9606
421 6OQ2 3 E Ubiquitin 9606
422 6OA9 2 H, J, K Ubiquitin 4932
423 6OAA 3 H Ubiquitin 4932
424 6O96 8 L Polyubiquitin-B 9606
425 6JMA 7 Y Ubiquitin 9606
426 6J99 7 L Ubiquitin 9606
427 6NQA 7 L Ubiquitin 9606
428 6NOG 5 L Ubiquitin 9606
429 6NN6 8 L Ubiquitin 9606
430 6QF8 1 A Polyubiquitin-B 9606
431 6NJ9 5 L Ubiquitin 9606
432 6N13 2 D ubiquitin 9606
433 6N13 4 A phosphoubiquitin 9606
434 6MSB 19 u, w Ubiquitin 9606
435 6MSD 19 u, w Ubiquitin 9606
436 6MSE 19 u Ubiquitin 9606
437 6MSG 19 u Ubiquitin 9606
438 6FTX 8 N, O Polyubiquitin-B 9606
439 5ZD0 1 A ubiquitin 9606
440 5YMY 1 A Ubiquitin 9606
441 5YMY 2 B Ubiquitin 9606
442 5VZM 1 A Ubiquitin UNP residues 1-76 9606
443 5XK4 1 A Polyubiquitin-B UNP residues 1-76 9606
444 5XK5 1 A Polyubiquitin-B UNP residues 1-76 9606
445 5VEY 2 B Polyubiquitin-B 9606
446 5VF0 1 A Polyubiquitin-B 9606
447 5XBO 1 A Polyubiquitin-B UNP residues 1-76 9606
448 5UJL 1 A, B Ubiquitin residues 1-76 9606
449 5UJN 1 A, B Ubiquitin 9606
450 5GJQ 34 y Polyubiquitin-B UNP RESIDUES 1-76 9606
451 5KGF 8 M, O Ubiquitin 9606
452 2NBD 1 A entity 9606
453 2NBE 1 A entity 9606
454 5A5B 9 9 UBIQUITIN ALDEHYDE 9606
455 2N3U 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
456 2N3V 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
457 2N3W 2 B, C Ubiquitin-60S ribosomal protein L40 UNP residues 1-76 9606
458 2N2K 1 A ubiquitin 9606
459 2N2K 2 B ubiquitin 9606
460 2N13 2 B Ubiquitin 9606
461 2N13 3 C Ubiquitin 9606
462 2MWS 1 A Ubiquitin UNP residues 1-76 9606
463 2MUR 2 B Ubiquitin 9606
464 2MSG 1 A Ubiquitin UNP residuse 1-72 9606
465 2MRO 1 A Polyubiquitin-B Human Ubiquitin 9606
466 2MRE 1 A Polyubiquitin-C unp residues 1-76 9606
467 2MOR 1 A Ubiquitin UNP residues 1-76 9606
468 2MJB 1 A Ubiquitin-60S ribosomal protein L40 Ubiquitin-like 3 domain 9606
469 2MJ5 1 A Polyubiquitin-C UNP residuses 1-76 9606
470 2RU6 1 A Ubiquitin 9606
471 2MCN 2 B Ubiquitin UNP residues 1-76 9606
472 2MBQ 1 A, B Ubiquitin UNP residues 1-76 9606
473 2MBO 1 A, B Ubiquitin UNP residues 1-76 9606
474 2MBH 2 A Ubiquitin 9606
475 2MBB 2 B Polyubiquitin-B UNP P0CG47 residues 1-76 9606
476 2LZ6 1 A Ubiquitin 9606
477 2LVO 1 A Ubiquitin 9606
478 2LVP 1 A, B Ubiquitin 9606
479 2LVQ 1 A, B Ubiquitin 9606
480 2RSU 1 A Ubiquitin 9606
481 2LJ5 1 A Ubiquitin 9606
482 2LD9 1 A Ubiquitin 9606
483 2L3Z 1 A Ubiquitin UNP Residues 1-76 9606
484 2L0T 1 A Ubiquitin 9606
485 2L0F 1 A Ubiquitin 9606
486 2L00 2 B Ubiquitin ubiquitin core domain 4932
487 2RR9 1 A, B ubiquitin 9606
488 2KWV 2 B Ubiquitin 9606
489 2KWU 2 B Ubiquitin 9606
490 2KTF 1 A Ubiquitin 9606
491 2KOX 1 A Ubiquitin 9606
492 2KN5 1 A Ubiquitin 9606
493 2KLG 1 A Ubiquitin 9606
494 2KJH 2 B Ubiquitin 9606
495 2KHW 2 B Ubiquitin 9606
496 2KDE 2 B, C Ubiquitin 8355
497 2KDF 2 B, C Ubiquitin 9606
498 2K8B 1 A Ubiquitin 9606
499 2K8C 1 A Ubiquitin 9606
500 2K6D 2 B Ubiquitin ubiquitin 9606
501 2K39 1 A Ubiquitin 8355
502 2JZZ 1 A Ubiquitin 9606
503 2JY6 1 A Ubiquitin protein 9606
504 2JWZ 1 A Ubiquitin 4932
505 2JT4 2 B Ubiquitin SH3 domain sequence database residues 350-420 4932
506 2Z59 2 B Ubiquitin 9606
507 2JRI 2 B, C UBC protein sequence database residues 318-469 9606
508 2PE9 1 A, B Ubiquitin 9606
509 2PEA 1 A, B Ubiquitin 9606
510 2NR2 1 A Ubiquitin 9606
511 2G3Q 2 B Ubiquitin 4932
512 2DEN 2 B Polyubiquitin-B 9606
513 2FUH 2 B Ubiquitin Ubiquitin 10116
514 1ZGU 2 B Ubiquitin 9606
515 2BGF 1 A, B DI-UBIQUITIN ISOPEPTIDE BOND BETWEEN GLY76A AND LYS48B 9606
516 1XQQ 1 A ubiquitin 9606
517 1WR1 1 A Ubiquitin 4932
518 1V80 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
519 1V81 1 A Ubiquitin/60s ribosomal protein L40 fusion 9913
520 1Q5W 2 B Ubiquitin 9606
521 1Q0W 2 B Ubiquitin 4932
522 1OTR 2 B Ubiquitin 4932
523 1G6J 1 A UBIQUITIN 9606
524 1FXT 2 B UBIQUITIN 9606
525 1D3Z 1 A PROTEIN (UBIQUITIN) 9606