Sequence Similarity Clusters for the Entities in PDB 2KOD

Entity #1 | Chains: A,B
HIV-1 CA C-terminal domain protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47701
95 % 16 19 1451
90 % 16 19 1480
70 % 16 19 1488
50 % 16 19 1541
40 % 16 19 1558
30 % 16 19 1536

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.