Sequence Similarity Clusters for the Entities in PDB 2KOD

Entity #1 | Chains: A,B
HIV-1 CA C-terminal domain protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48393
95 % 16 19 1475
90 % 16 19 1506
70 % 16 19 1512
50 % 16 19 1564
40 % 16 19 1583
30 % 16 19 1559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures