2KOD

A high-resolution NMR structure of the dimeric C-terminal domain of HIV-1 CA


Sequence Similarity Clusters for the Entities in PDB 2KOD

Entity #1 | Chains: A,B
HIV-1 CA C-terminal domain protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 33335
95 % 17 20 1826
90 % 17 20 1868
70 % 17 20 1939
50 % 17 20 1989
40 % 17 20 2018
30 % 18 21 1955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures