Sequence Similarity Clusters for the Entities in PDB 2KOD

Entity #1 | Chains: A,B
HIV-1 CA C-terminal domain protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39159
95 % 16 19 1508
90 % 16 19 1534
70 % 16 19 1546
50 % 16 19 1599
40 % 16 19 1606
30 % 16 19 1588

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures