Sequence Similarity Clusters for the Entities in PDB 2K9J

Entity #1 | Chains: A
Integrin alpha-IIb light chain protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 49241
95 % 2 3 30643
90 % 2 3 28638
70 % 2 3 26568
50 % 2 3 23312
40 % 2 3 21309
30 % 2 3 19098
Entity #2 | Chains: B
Integrin beta-3 protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 36557
95 % 3 5 18504
90 % 3 5 18395
70 % 3 5 16864
50 % 3 5 15182
40 % 3 5 14116
30 % 3 5 13103

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures