Sequence Similarity Clusters for the Entities in PDB 2K8C

Entity #1 | Chains: A
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 374 393 4
95 % 464 490 6
90 % 475 504 6
70 % 525 555 9
50 % 539 570 10
40 % 541 574 12
30 % 555 591 20
Entity #2 | Chains: B
Phospholipase A-2-activating protein protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 29045
95 % 4 4 23929
90 % 4 4 20360
70 % 4 4 18770
50 % 4 4 16772
40 % 4 4 15508
30 % 4 4 14023

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures