2JO0

The solution structure of the monomeric species of the C terminal domain of the CA protein of HIV-1


Sequence Similarity Clusters for the Entities in PDB 2JO0

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 88216
95 % 20 20 1843
90 % 20 20 1876
70 % 20 20 1958
50 % 20 20 1999
40 % 20 20 2031
30 % 21 21 1957

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures