Sequence Similarity Clusters for the Entities in PDB 2JLZ

Entity #1 | Chains: A,B
SERINE PROTEASE SUBUNIT NS3 protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 6443
95 % 6 11 4177 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.4
PDBFlex
90 % 6 11 4273
70 % 6 13 3412
50 % 28 40 1357
40 % 28 40 1409
30 % 28 40 1444
Entity #2 | Chains: C,D
5'-R(*AP*GP*AP*CP*UP*AP*AP*CP*AP*AP*CP*U)-3' rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures