Sequence Similarity Clusters for the Entities in PDB 2IY5

Entity #1 | Chains: A
PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 9454
95 % 7 9 9683 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 7 9 9605
70 % 7 9 9317
50 % 7 9 8652
40 % 13 15 3824
30 % 13 15 3624
Entity #2 | Chains: B
PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN protein, length: 785 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70498
95 % 10 12 7863 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 10 12 7829
70 % 10 12 7632
50 % 10 12 7174
40 % 10 12 6925
30 % 18 20 2823
Entity #3 | Chains: T
TRNAPHE rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures