Sequence Similarity Clusters for the Entities in PDB 2IVN

Entity #1 | Chains: A
O-SIALOGLYCOPROTEIN ENDOPEPTIDASE protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14388
95 % 1 3 13991 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 3 13787
70 % 1 3 13057
50 % 1 5 6827
40 % 1 5 6616
30 % 2 12 3076

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2IVN 1 A O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 29292 2.3.1.234 | Details
2 2IVP 1 A O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 29292 2.3.1.234 | Details
3 2IVO 1 A, B, C, D UP1 29292 2.3.1.234 | Details