Sequence Similarity Clusters for the Entities in PDB 2IVN

Entity #1 | Chains: A
O-SIALOGLYCOPROTEIN ENDOPEPTIDASE protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14161
95 % 1 3 13818 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 3 13655
70 % 1 3 12950
50 % 1 5 6828
40 % 1 5 6617
30 % 2 12 3073

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3ZEU 2 B, E PROBABLE TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN GCP TITLE STRUCTURE OF A SALMONELLA TYPHIMURIUM YGJD-YEAZ HETERODIMER BOUND TO ATPGAMMAS 28901
2 2IVN 1 A O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 29292 2.3.1.234 | Details
3 6N9A 2 D tRNA N6-adenosine threonylcarbamoyltransferase 2336 2.3.1.234 | Details
4 3ZET 2 B PROBABLE TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN GCP TITLE STRUCTURE OF A SALMONELLA TYPHIMURIUM YGJD-YEAZ HETERODIMER. 28901 2.3.1.234 | Details
5 4WQ5 1 A, B tRNA N6-adenosine threonylcarbamoyltransferase 562 2.3.1.234 | Details
6 4YDU 1 A, B tRNA N6-adenosine threonylcarbamoyltransferase 562 2.3.1.234 | Details
7 4WQ4 1 A, B tRNA N6-adenosine threonylcarbamoyltransferase 562 2.3.1.234 | Details
8 2IVP 1 A O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 29292 2.3.1.234 | Details
9 2IVO 1 A, B, C, D UP1 29292 2.3.1.234 | Details
10 5JMV 1 A, B, C Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein 2190 2.3.1.234 | Details 2.7.11.1 | Details
11 6FPE 2 B, G tRNA N6-adenosine threonylcarbamoyltransferase 2336 2.3.1.234 | Details
12 3ENO 1 A, B Putative O-sialoglycoprotein endopeptidase 2303 3.4.24.57 | Details