Sequence Similarity Clusters for the Entities in PDB 2IVN

Entity #1 | Chains: A
O-SIALOGLYCOPROTEIN ENDOPEPTIDASE protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14213
95 % 1 3 13832 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 3 13783
70 % 1 3 12919
50 % 1 5 6785
40 % 1 5 6576
30 % 2 12 3058

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures