Sequence Similarity Clusters for the Entities in PDB 2I87

Entity #1 | Chains: A,B
D-alanine-D-alanine ligase protein, length: 364 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14472
95 % 1 4 10533 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 1 4 10434
70 % 1 4 10048
50 % 1 4 9316
40 % 1 5 7309
30 % 15 48 546

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures