Sequence Similarity Clusters for the Entities in PDB 2HV8

Entity #1 | Chains: A,B,C
Ras-related protein Rab-11A protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 2483
95 % 3 20 1443 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.3
PDBFlex
90 % 3 20 1479
70 % 8 42 663
50 % 6 38 816
40 % 6 38 849
30 % 6 38 888
Entity #2 | Chains: D,E,F
Rab11 family-interacting protein 3 protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4745
95 % 1 3 5512 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.8
PDBFlex
90 % 1 3 5542
70 % 1 3 5485
50 % 1 3 5279
40 % 1 3 5154
30 % 1 3 4942

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2F9L 1 A RAB11B, member RAS oncogene family GTPase domain, residues 8 to 205 9606 3.6.5.2 | Details
2 3RWO 1 A, B GTP-binding protein YPT32/YPT11 4932
3 1OIX 1 A RAS-RELATED PROTEIN RAB-11A DELETION MUTANT LACKING THE 43 C-TERMINAL RESIDUES RESIDUES 1-173 9606
4 3TSO 1 A, B Ras-related protein Rab-25 UNP residues 7-180 9606
5 2F9M 1 A RAB11B, member RAS oncogene family GTPase domain, residues 8 to 205 9606 3.6.5.2 | Details
6 2HV8 1 A, B, C Ras-related protein Rab-11A GTPase domain 9606
7 1YZK 1 A Ras-related protein Rab-11A 9606
8 4C4P 1 A RAS-RELATED PROTEIN RAB-11A RESIDUES 1-173 9606
9 5JCZ 1 A, D, I Ras-related protein Rab-11A 9606
10 3RWM 1 B GTP-binding protein YPT32/YPT11 4932
11 1OIV 1 A, B RAS-RELATED PROTEIN RAB-11A DELETION MUTANT LACKING THE 43 C-TERMINAL RESIDUES RESIDUES 1-173 9606
12 4LX0 1 A, C Ras-related protein Rab-11A Dilute domain residues 1456-1848 9606
13 6IY1 1 A, B, C, E Ras-related protein Rab-11A 9606
14 6IY1 2 D Ras-related protein Rab-11A 9606
15 6IY1 3 F Ras-related protein Rab-11A GDP 9606
16 5UB8 1 A Likely rab family GTP-binding protein 5476
17 2OIL 1 A Ras-related protein Rab-25 9606
18 3CPJ 2 B GTP-binding protein YPT31/YPT8 4932
19 1OIW 1 A RAS-RELATED PROTEIN RAB-11A DELETION MUTANT LACKING THE 43 C-TERMINAL RESIDUES RESIDUES 1-173 9606
20 2GZH 1 A Ras-related protein Rab-11A G protein domain 9606 3.6.5.2 | Details
21 2GZD 1 A, B Ras-related protein Rab-11A G protein domain 9606 3.6.5.2 | Details
22 4OJK 1 A, B Ras-related protein Rab-11B 9606 3.6.5.2 | Details
23 4UJ5 1 A, B RAS-RELATED PROTEIN RAB-11A GTPASE DOMAIN, RESIDUES 6-186 9606
24 5C46 2 F Ras-related protein Rab-11A 9606
25 4LWZ 1 A, C Ras-related protein Rab-11A Dilute domain residues 1456-1848 9606
26 4UJ3 1 A, D, G, J, M, P, S, V RAS-RELATED PROTEIN RAB-11A GTPASE DOMAIN 9606
27 4D0L 2 B, D, F RAS-RELATED PROTEIN RAB-11A 9606 3.6.5.2 | Details
28 6DJL 1 A, F, G, H Ras-related protein Rab-11A 9606
29 5FBR 2 B Ras-related protein Rab-11A 9606
30 5EUQ 1 B Ras-related protein Rab-11A 9606
31 5FBV 2 B Ras-related protein Rab-11A 9606
32 5C4G 1 B Ras-related protein Rab-11A 9606
33 5FBL 2 B Ras-related protein Rab-11A 9606
34 5FBW 2 B Ras-related protein Rab-11A 9606
35 6IXV 2 E, F, G, H Ras-related protein Rab-11A 9606
36 5FBQ 2 B Ras-related protein Rab-11A 9606
37 4UJ4 1 A, D, G, J Ras-related protein Rab-11A GTPASE DOMAIN, RESIDUES 4-186 9606
38 4D0M 2 B, D, H, J, N, P, R, T, X, Z, d, h RAS-RELATED PROTEIN RAB-11A 9606 3.6.5.2 | Details