Sequence Similarity Clusters for the Entities in PDB 2HAX

Entity #1 | Chains: C,D
5'-D(*TP*TP*TP*TP*TP*T)-3' dna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Cold shock protein cspB protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14854
95 % 2 8 5266 Flexibility: Medium
Max RMSD: 18.3, Avg RMSD: 4.7
PDBFlex
90 % 2 8 5315
70 % 2 18 2732
50 % 3 30 1662
40 % 3 31 1668
30 % 3 31 1699

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures