Sequence Similarity Clusters for the Entities in PDB 2H8N

Entity #1 | Chains: A,B,C,D
Histone deacetylase 4 protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30034
95 % 1 2 11751 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 2 11603
70 % 1 2 11085
50 % 1 2 10045
40 % 1 2 9639
30 % 1 2 8810

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures