Sequence Similarity Clusters for the Entities in PDB 2G5H

Entity #1 | Chains: A
Glutamyl-tRNA(Gln) amidotransferase subunit A protein, length: 485 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 16436
95 % 3 6 15567 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 6 15314
70 % 3 6 14398
50 % 4 10 2003
40 % 5 13 1839
30 % 10 18 1529
Entity #2 | Chains: B
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B protein, length: 483 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 16094
95 % 3 6 15310 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.3
PDBFlex
90 % 3 6 15065
70 % 3 6 14173
50 % 3 6 12822
40 % 4 10 2311
30 % 4 10 2292
Entity #3 | Chains: C
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 16093
95 % 3 6 15309 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 3 6 15064
70 % 3 6 14172
50 % 3 6 12821
40 % 3 6 11960
30 % 3 6 10911

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures