Sequence Similarity Clusters for the Entities in PDB 2G5B

Entity #1 | Chains: A,C,E,G
6A7 Fab Light Chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22715
95 % 40 71 452 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.0
PDBFlex
90 % 50 97 309
70 % 1159 2457 2
50 % 2983 6352 1
40 % 2983 6352 1
30 % 3003 6398 1
Entity #2 | Chains: B,D,F,H
6A7 Fab Heavy Chain protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22714
95 % 1 1 22126 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 32 39 1321
70 % 1427 3023 1
50 % 2984 6352 1
40 % 2984 6352 1
30 % 3004 6398 1
Entity #3 | Chains: I,J,K,L
Bax Peptide protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures