Sequence Similarity Clusters for the Entities in PDB 2FOJ

Entity #1 | Chains: A
Ubiquitin carboxyl-terminal hydrolase 7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 9219
95 % 4 14 4738 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.2
PDBFlex
90 % 4 14 4805
70 % 2 12 5244
50 % 2 12 5360
40 % 2 12 5219
30 % 2 12 4997
Entity #2 | Chains: B
p53 peptide protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures