Sequence Similarity Clusters for the Entities in PDB 2EK0

Entity #1 | Chains: A,B
Stage V sporulation protein S (SpoVS) related protein protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 19608
95 % 1 2 18926 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 1 2 18528
70 % 1 2 16575
50 % 1 2 15406
40 % 1 2 13843
30 % 1 2 12535

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures