Sequence Similarity Clusters for the Entities in PDB 2E7L

Entity #1 | Chains: A,B
Cytotoxic Tcell receptor protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44053
95 % 3 6 5485 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 3 6 5420
70 % 3 6 5476
50 % 6 11 3473
40 % 6 11 3438
30 % 675 1213 6
Entity #2 | Chains: C,D
Beta-chain protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 5773
95 % 2 5 5647 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 15 19 1440
70 % 19 24 1271
50 % 19 24 1295
40 % 19 24 1351
30 % 27 39 974
Entity #3 | Chains: E,F
H-2 class I histocompatibility antigen, L-D alpha chain protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52765
95 % 5 14 2521 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 5 14 2580
70 % 5 14 2623
50 % 6 15 2547
40 % 6 15 2580
30 % 6 15 2558
Entity #4 | Chains: P,Q
Peptide (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures