Sequence Similarity Clusters for the Entities in PDB 2DKG

Entity #1 | Chains: A,B
235aa long hypothetical biotin-[acetyl-CoA-carboxylase] ligase protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 3104
95 % 21 26 1233 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 21 26 1263
70 % 21 26 1301
50 % 21 26 1320
40 % 21 26 1386
30 % 21 31 1207

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures