Sequence Similarity Clusters for the Entities in PDB 2CLW

Entity #1 | Chains: A
UBIQUITIN-CONJUGATING ENZYME E2 D2 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 13 4789
95 % 20 47 892 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 22 58 680
70 % 22 63 653
50 % 26 68 584
40 % 44 112 345
30 % 69 176 205
Entity #2 | Chains: B,C,D
UBIQUITIN-CONJUGATING ENZYME E2 D2 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 13 4789
95 % 21 47 892 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 23 58 680
70 % 23 63 653
50 % 27 68 584
40 % 45 112 345
30 % 70 176 205

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures