Sequence Similarity Clusters for the Entities in PDB 2CF2

Entity #1 | Chains: A,J
FATTY ACID SYNTHASE, KS DOMAIN protein, length: 406 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 8212
95 % 24 25 601 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 24 25 630
70 % 26 27 632
50 % 31 32 630
40 % 94 95 286
30 % 95 96 295
Entity #2 | Chains: B,K
FATTY ACID SYNTHASE, MAT DOMAIN protein, length: 304 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 5166
95 % 2 3 5439 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 2 3 5474
70 % 2 3 5408
50 % 4 5 4414
40 % 4 5 4325
30 % 32 33 1402
Entity #3 | Chains: C,L
FATTY ACID SYNTHASE, DH DOMAIN protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50078
95 % 1 1 32852 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 31499
70 % 1 1 28287
50 % 1 1 24773
40 % 1 1 22584
30 % 1 1 20158
Entity #4 | Chains: D,M
FATTY ACID SYNTHASE, ER DOMAIN protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50080
95 % 3 3 20016 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 3 3 18526
70 % 3 3 20966
50 % 3 3 19078
40 % 3 3 17494
30 % 3 3 13481
Entity #5 | Chains: E,N
FATTY ACID SYNTHASE, KR DOMAIN protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50081
95 % 1 1 32853 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 4 4 5003
70 % 17 17 1297
50 % 54 54 345
40 % 233 234 32
30 % 842 843 3

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3SBM 1 A DisD protein UNP residues 1-281 56 2.3.1.39 | Details
2 5DZ6 1 A Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC 1423 2.3.1.39 | Details
3 3IM9 1 A Malonyl CoA-acyl carrier protein transacylase residues 5-308 1280 2.3.1.39 | Details
4 3TQE 1 A Malonyl-CoA-[acyl-carrier-protein] transacylase 777 2.3.1.39 | Details
5 3RGI 1 A DisD protein transferase domain (UNP residues 1-286) 56 2.3.1.39 | Details
6 1MLA 1 A MALONYL-COENZYME A ACYL CARRIER PROTEIN TRANSACYLASE 562 2.3.1.39 | Details
7 3QAT 1 A, B Malonyl CoA-acyl carrier protein transacylase 38323 2.3.1.39 | Details
8 6APF 1 A, B DisD protein transferase domain (UNP residues 1-281) 56
9 3K89 1 A Malonyl CoA-ACP transacylase 347 2.3.1.39 | Details
10 3HJV 1 A, B Malonyl Coa-acyl carrier protein transacylase 666
11 5YPV 1 A Malonyl CoA-acyl carrier protein transacylase FabD 470 2.3.1.39 | Details
12 6MHP 1 A Malonyl CoA-acyl carrier protein transacylase 1390 2.3.1.39 | Details
13 2G2O 1 A Malonyl CoA-acyl carrier protein transacylase 562 2.3.1.39 | Details
14 3EZO 1 A Malonyl CoA-acyl carrier protein transacylase 28450 2.3.1.39 | Details
15 2G1H 1 A Malonyl CoA-acyl carrier protein transacylase 562 2.3.1.39 | Details
16 6APG 1 A, B DisD protein transferase domain (UNP residues 1-281) 56
17 5ZK4 1 A, B DisD protein 56
18 3H0P 1 A, B S-malonyltransferase 90371 2.3.1.39 | Details
19 1NM2 1 A malonyl CoA:acyl carrier protein malonyltransferase Malonyl-CoA:ACP Transacylase 1902 2.3.1.39 | Details
20 3R97 1 A Malonyl CoA-ACP transacylase 347 2.3.1.39 | Details
21 3IM8 1 A Malonyl acyl carrier protein transacylase 1313 2.3.1.39 | Details
22 3PTW 1 A Malonyl CoA-acyl carrier protein transacylase 1502 2.3.1.39 | Details
23 2CUY 1 A, B Malonyl CoA-[acyl carrier protein] transacylase 274 2.3.1.39 | Details
24 2QC3 1 A Malonyl CoA-acyl carrier protein transacylase 1773 2.3.1.39 | Details
25 2G2Y 1 A Malonyl CoA-acyl carrier protein transacylase 562 2.3.1.39 | Details
26 4RR5 1 A Malonyl CoA-acyl carrier protein transacylase 1148 2.3.1.39 | Details
27 5DZ7 1 A Polyketide biosynthesis protein PksE 1423 2.3.1.39 | Details
28 2H1Y 1 A, B Malonyl coenzyme A-acyl carrier protein transacylase 210 2.3.1.39 | Details
29 6APK 1 A DisD protein UNP residues 1-282 56 2.3.1.39 | Details
30 2G2Z 1 A Malonyl CoA-acyl carrier protein transacylase 562 2.3.1.39 | Details
31 2QJ3 1 A, B Malonyl CoA-acyl carrier protein transacylase 1773 2.3.1.39 | Details
32 2CF2 2 B, K FATTY ACID SYNTHASE, MAT DOMAIN 9823 2.3.1.85 | Details
33 2CDH 2 4, 5, 6, 7, 8, 9, M, N, O, P, Q, R MALONYL/PALMITOYL TRANSFERASE PDB ENTRY 1NM2 5541