Sequence Similarity Clusters for the Entities in PDB 2CF2

Entity #1 | Chains: A,J
FATTY ACID SYNTHASE, KS DOMAIN protein, length: 406 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 8218
95 % 24 25 598 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 24 25 635
70 % 26 27 629
50 % 31 32 628
40 % 75 76 378
30 % 95 96 297
Entity #2 | Chains: B,K
FATTY ACID SYNTHASE, MAT DOMAIN protein, length: 304 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 5194
95 % 2 3 5448 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 2 3 5485
70 % 2 3 5429
50 % 4 5 4427
40 % 4 5 4340
30 % 32 33 1398
Entity #3 | Chains: C,L
FATTY ACID SYNTHASE, DH DOMAIN protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50147
95 % 1 1 32860 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 31528
70 % 1 1 28350
50 % 1 1 24802
40 % 1 1 22633
30 % 1 1 20198
Entity #4 | Chains: D,M
FATTY ACID SYNTHASE, ER DOMAIN protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50149
95 % 3 3 20021 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 3 3 18545
70 % 3 3 17851
50 % 3 3 16030
40 % 3 3 14868
30 % 3 3 13489
Entity #5 | Chains: E,N
FATTY ACID SYNTHASE, KR DOMAIN protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54532
95 % 1 1 32861 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 4 4 5000
70 % 17 17 1302
50 % 48 48 382
40 % 234 235 30
30 % 841 842 3

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2VBA 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1 562 2.3.1.41 | Details
2 2VB8 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1 562 2.3.1.41 | Details
3 2VB9 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1 562 2.3.1.41 | Details
4 2VB7 1 A, B, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1 562 2.3.1.41 | Details
5 2VB7 2 C 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1 562 2.3.1.41 | Details
6 2BYW 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
7 1EK4 1 A, B, C, D BETA-KETOACYL [ACYL CARRIER PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
8 2BZ4 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
9 2BYX 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I FATTY ACID THIOESTER AT C163 562 2.3.1.41 | Details
10 2BYZ 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I THIOESTER LINK FROM C163 TO FATTY ACID LIGAND 562 2.3.1.41 | Details
11 1H4F 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
12 2BUH 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
13 2BZ3 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I THIOESTER LINK FROM C163 TO FATTY ACID LIGAND 562 2.3.1.41 | Details
14 2AQB 1 A, B, C, D 3-oxoacyl-[acyl-carrier-protein] synthase I 562 2.3.1.41 | Details
15 2AQ7 1 A, B, C, D 3-oxoacyl-[acyl-carrier-protein] synthase I 562 2.3.1.41 | Details
16 1DD8 1 A, B, C, D BETA-KETOACYL [ACYL CARRIER PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
17 1F91 1 A, B, C, D BETA-KETOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
18 2BUI 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I THIOESTER LINK BETWEEN CYS 163 AND C1 IN OCTANOIC ACID 562 2.3.1.41 | Details
19 2BYY 1 A, B, C, D 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
20 1FJ4 1 A, B, C, D BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
21 1FJ8 1 A, B, C, D BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I 562 2.3.1.41 | Details
22 5KOF 1 A, B 3-oxoacyl-[acyl-carrier-protein] synthase 1 562 2.3.1.41 | Details
23 1G5X 1 A, B, C, D BETA-KETOACYL ACYL CARRIER PROTEIN SYNTHASE I 562 2.3.1.41 | Details
24 2CF2 1 A, J FATTY ACID SYNTHASE, KS DOMAIN 9823 2.3.1.41 | Details
25 2CDH 3 A, B, C, D, E, F KETOACYL SYNTHASE PDB ENTRY 1DD8 5541 2.3.1.41 | Details