Sequence Similarity Clusters for the Entities in PDB 2CCI

Entity #1 | Chains: A,C
Cyclin-dependent kinase 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 353 359 50
95 % 406 413 46 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 406 413 51
70 % 406 413 61
50 % 430 439 80
40 % 447 468 91
30 % 964 1066 13
Entity #2 | Chains: B,D
Cyclin-A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 86 89 210
95 % 109 112 225 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 113 116 230
70 % 113 116 257
50 % 113 116 290
40 % 113 116 303
30 % 121 125 289
Entity #3 | Chains: F,I
Cell division control protein 6 homolog protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 42573
95 % 1 1 37132
90 % 1 1 35493
70 % 1 1 31574
50 % 1 1 27514
40 % 1 1 25059
30 % 1 1 22317

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2CCI 3 F, I Cell division control protein 6 homolog PEPTIDE MODIFIED TO GENERATE ACTIVE SITE SEQUENCE RESIDUES 71-100 9606