Sequence Similarity Clusters for the Entities in PDB 2C5O

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 242 356 50
95 % 260 410 40 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 260 410 44
70 % 260 410 52
50 % 268 436 78
40 % 269 461 87
30 % 395 736 24
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 88 190
95 % 23 111 210 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 26 115 213
70 % 26 115 236
50 % 26 115 242
40 % 26 115 259
30 % 28 124 251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures