Sequence Similarity Clusters for the Entities in PDB 2BS4

Entity #1 | Chains: A,D
QUINOL-FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT A protein, length: 656 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 8424
95 % 4 5 7397 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 4 5 7389
70 % 4 5 7260
50 % 5 7 4504
40 % 5 7 4547
30 % 28 83 511
Entity #2 | Chains: B,E
QUINOL-FUMARATE REDUCTASE IRON-SULFUR SUBUNIT B protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 6535
95 % 4 5 6709 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 4 5 6737
70 % 4 5 6648
50 % 4 5 6338
40 % 4 5 6149
30 % 7 27 1249
Entity #3 | Chains: C,F
QUINOL-FUMARATE REDUCTASE DIHEME CYTOCHROME B SUBUNIT C protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42869
95 % 4 5 7241 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 4 5 7248
70 % 4 5 7115
50 % 4 5 6735
40 % 4 5 6514
30 % 4 5 6161

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures