Sequence Similarity Clusters for the Entities in PDB 2BGN

Entity #1 | Chains: A,B,C,D
DIPEPTIDYL PEPTIDASE IV protein, length: 728 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 68 71 188
95 % 101 104 145 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 101 104 156
70 % 115 122 149
50 % 116 123 170
40 % 116 123 181
30 % 122 131 177
Entity #2 | Chains: E,F,G,H
ADENOSINE DEAMINASE protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 7914
95 % 17 17 3269 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 18 18 3049
70 % 30 30 1520
50 % 30 30 1558
40 % 30 30 1610
30 % 32 32 1524
Entity #3 | Chains: W,X,Y,Z
TAT PROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures