Sequence Similarity Clusters for the Entities in PDB 2B5I

Entity #1 | Chains: A
Interleukin-2 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3787
95 % 9 20 1063 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 9 20 1087
70 % 10 21 1083
50 % 11 23 1065
40 % 11 23 1074
30 % 11 23 1055
Entity #2 | Chains: B
Interleukin-2 receptor beta chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4111
95 % 3 5 3827 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 3 5 3880
70 % 3 5 3823
50 % 3 5 3719
40 % 3 5 3581
30 % 3 5 3342
Entity #3 | Chains: C
Cytokine receptor common gamma chain protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 3111
95 % 2 5 3845 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.2
PDBFlex
90 % 2 5 3895
70 % 2 5 3839
50 % 2 5 3735
40 % 2 5 3597
30 % 2 5 3361
Entity #4 | Chains: D
Interleukin-2 receptor alpha chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61497
95 % 1 5 7939 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.6
PDBFlex
90 % 1 5 7885
70 % 1 5 7659
50 % 1 5 7055
40 % 1 5 6553
30 % 1 5 5850

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures