Sequence Similarity Clusters for the Entities in PDB 2B5I

Entity #1 | Chains: A
Interleukin-2 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 3018
95 % 9 20 1085 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 9 20 1102
70 % 10 21 1098
50 % 11 23 1085
40 % 11 23 1097
30 % 11 23 1090
Entity #2 | Chains: B
Interleukin-2 receptor beta chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4487
95 % 3 5 3861 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 3 5 3922
70 % 3 5 3846
50 % 3 5 3741
40 % 3 5 3545
30 % 3 5 3260
Entity #3 | Chains: C
Cytokine receptor common gamma chain protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 3508
95 % 2 5 3860 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.2
PDBFlex
90 % 2 5 3921
70 % 2 5 3845
50 % 2 5 3740
40 % 2 5 3544
30 % 2 5 3259
Entity #4 | Chains: D
Interleukin-2 receptor alpha chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47627
95 % 1 5 7859 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.6
PDBFlex
90 % 1 5 7792
70 % 1 5 7549
50 % 1 5 6948
40 % 1 5 6423
30 % 1 5 5614

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures