2B4J

Structural basis for the recognition between HIV-1 integrase and LEDGF/p75


Sequence Similarity Clusters for the Entities in PDB 2B4J

Entity #1 | Chains: A,B
Integrase (IN) protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 15 4464
95 % 112 173 134
90 % 114 178 136
70 % 93 131 222
50 % 93 131 246
40 % 93 131 262
30 % 93 131 276
Entity #2 | Chains: C,D
PC4 and SFRS1 interacting protein protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 2279
95 % 1 5 2941
90 % 1 5 2989
70 % 1 5 3039
50 % 1 5 3030
40 % 1 5 3027
30 % 1 5 3004

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures