Sequence Similarity Clusters for the Entities in PDB 2B2T

Entity #1 | Chains: A,B
Chromodomain-helicase-DNA-binding protein 1 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35543
95 % 4 6 7715 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 6 8 5891
70 % 5 7 5891
50 % 5 7 5900
40 % 5 7 5730
30 % 5 7 5256
Entity #2 | Chains: C
Chromodomain-helicase-DNA-binding protein 1 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 19093
95 % 3 5 16564 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 3 5 16317
70 % 3 5 15279
50 % 3 5 13773
40 % 3 5 12808
30 % 3 5 11669
Entity #3 | Chains: D
Histone H3 tail protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 15 2114
95 % 15 30 1261
90 % 15 30 1286
70 % 15 28 1679
50 % 15 28 1705
40 % 15 28 1764
30 % 15 28 1797

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures