Sequence Similarity Clusters for the Entities in PDB 2ASB

Entity #1 | Chains: B
ribosomal RNA (5'- GAACUCAAUAG -3') rna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Transcription elongation protein nusA protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30882
95 % 1 2 26626 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 25685
70 % 1 2 23429
50 % 1 2 20584
40 % 1 2 18849
30 % 1 2 16901

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures