Sequence Similarity Clusters for the Entities in PDB 2APO

Entity #1 | Chains: A
Probable tRNA pseudouridine synthase B protein, length: 357 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66149
95 % 1 1 48057
90 % 1 1 51385
70 % 1 1 40226
50 % 1 1 34833
40 % 1 1 31499
30 % 1 1 27853
Entity #2 | Chains: B
Ribosome biogenesis protein Nop10 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 52262
95 % 1 2 33527
90 % 1 2 36510
70 % 1 2 32491
50 % 1 16 4185
40 % 1 16 4120
30 % 1 16 4026

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures