Sequence Similarity Clusters for the Entities in PDB 2ANK

Entity #1 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 237 298 98
95 % 283 362 79 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.6
PDBFlex
90 % 281 360 84
70 % 293 391 78
50 % 293 391 101
40 % 293 393 121
30 % 1559 1949 6
Entity #2 | Chains: L
Thrombin light chain protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 274 349 53
95 % 220 285 126 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 220 285 130
70 % 213 277 148
50 % 213 277 171
40 % 213 277 183
30 % 213 277 192
Entity #3 | Chains: P
synthetic peptide protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures