Sequence Similarity Clusters for the Entities in PDB 2AJY

Entity #1 | Chains: L
Antibody 7A1 Fab' protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 11934
95 % 6 7 10384 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 6 7 10284
70 % 811 2391 2
50 % 1029 3030 2
40 % 1029 3030 2
30 % 2102 6153 1
Entity #2 | Chains: H
Antibody 7A1 Fab' protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 11249
95 % 6 7 11925 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 6 7 11751
70 % 999 2928 1
50 % 1060 3079 1
40 % 1060 3079 1
30 % 2103 6153 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures