Sequence Similarity Clusters for the Entities in PDB 2AHI

Entity #1 | Chains: E,F,G,H
5'-D(*CP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*G)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D
Cellular tumor antigen p53 protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 31 498
95 % 68 109 153 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.7
PDBFlex
90 % 69 110 168
70 % 71 125 171
50 % 71 141 152
40 % 71 141 165
30 % 71 141 169

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures