Sequence Similarity Clusters for the Entities in PDB 2AD8

Entity #1 | Chains: A,C
Methanol dehydrogenase subunit 1 protein, length: 571 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7422
95 % 3 5 8502 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 5 8444
70 % 3 5 7874
50 % 6 15 1639
40 % 6 15 1740
30 % 6 16 1667
Entity #2 | Chains: B,D
Methanol dehydrogenase subunit 2 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7553
95 % 3 5 8175 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 5 8130
70 % 3 5 7987
50 % 4 10 2417
40 % 4 10 2446
30 % 4 10 2424

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures