Sequence Similarity Clusters for the Entities in PDB 2A19

Entity #1 | Chains: A
Eukaryotic translation initiation factor 2 alpha subunit protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47849
95 % 1 3 28763 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 1 3 27709
70 % 1 3 22839
50 % 2 4 18388
40 % 2 4 16925
30 % 2 4 15231
Entity #2 | Chains: B,C
Interferon-induced, double-stranded RNA-activated protein kinase protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32355
95 % 1 2 28762 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.5
PDBFlex
90 % 1 2 27708
70 % 1 2 25089
50 % 1 2 22056
40 % 1 2 20183
30 % 13 20 2290

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures