Sequence Similarity Clusters for the Entities in PDB 1ZQT

Entity #1 | Chains: T
DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)) protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 299 306 101
95 % 359 368 86 Flexibility: Low
Max RMSD: 14.0, Avg RMSD: 2.9
PDBFlex
90 % 359 368 91
70 % 359 368 106
50 % 359 368 134
40 % 359 368 152
30 % 478 491 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures