Sequence Similarity Clusters for the Entities in PDB 1ZDU

Entity #1 | Chains: A
Orphan nuclear receptor NR5A2 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 15 2833
95 % 16 17 2894 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 16 17 3000
70 % 18 20 2448
50 % 23 27 1851
40 % 23 27 1901
30 % 619 718 14
Entity #2 | Chains: P,Q
Nuclear receptor coactivator 2 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures