Sequence Similarity Clusters for the Entities in PDB 1Z1D

Entity #1 | Chains: A
Replication protein A 32 kDa subunit protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 51901
95 % 1 2 35325
90 % 1 2 33614
70 % 1 2 30067
50 % 1 2 26399
40 % 1 2 24092
30 % 1 2 21433
Entity #2 | Chains: B
Large T antigen protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 3429
95 % 12 14 3657
90 % 12 14 3714
70 % 16 18 2893
50 % 16 18 2890
40 % 16 18 2895
30 % 16 18 2866

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures