Sequence Similarity Clusters for the Entities in PDB 1YVJ

Entity #1 | Chains: A
Tyrosine-protein kinase JAK3 protein, length: 290 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18648
95 % 25 36 1119 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.0
PDBFlex
90 % 25 36 1151
70 % 25 36 1196
50 % 87 117 355
40 % 87 117 367
30 % 863 1168 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures