Sequence Similarity Clusters for the Entities in PDB 1YTI

Entity #1 | Chains: A
SIV PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 35789
95 % 3 7 9796 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 3 7 9490
70 % 16 26 1396
50 % 691 778 5
40 % 691 778 6
30 % 691 778 12
Entity #2 | Chains: I
PEPTIDE PRODUCT protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures