Sequence Similarity Clusters for the Entities in PDB 1YRR

Entity #1 | Chains: A,B
N-acetylglucosamine-6-phosphate deacetylase protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 9962
95 % 1 4 8500 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.1
PDBFlex
90 % 1 4 8414
70 % 1 4 8185
50 % 1 6 4868
40 % 1 6 4753
30 % 1 8 3398

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1YRR 1 A, B N-acetylglucosamine-6-phosphate deacetylase 562 3.5.1.25 | Details
2 6FV4 1 A, B N-acetylglucosamine-6-phosphate deacetylase 1772 3.5.1.25 | Details
3 2P53 1 A, B N-acetylglucosamine-6-phosphate deacetylase 562 3.5.1.25 | Details
4 2P50 1 A, B, C, D N-acetylglucosamine-6-phosphate deacetylase 562 3.5.1.25 | Details
5 3IV8 1 A, B, C, D N-acetylglucosamine-6-phosphate deacetylase 666 3.5.1.25 | Details
6 1YMY 1 A, B N-acetylglucosamine-6-phosphate deacetylase 562 3.5.1.25 | Details
7 3EGJ 1 A, B N-acetylglucosamine-6-phosphate deacetylase 666 3.5.1.25 | Details
8 6FV3 1 A, B, C, D N-acetylglucosamine-6-phosphate deacetylase 1772 3.5.1.25 | Details